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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THCA rs11724713 chr4:88194345 G/T 0.000277 488 16.07 16.23 11.33 KM Plot
THCA rs11726968 chr4:1063827 C/T 1.42E-6 481 15.9 15.57 9.85 KM Plot
THCA rs11727902 chr4:88213222 A/G 0.00025 490 9.73 14.97 16.37 KM Plot
THCA rs11731238 chr4:1063833 A/G 2.8E-5 486 15.9 15.83 9.85 KM Plot
THCA rs11731239 chr4:1063836 A/G 2.9E-5 484 15.9 15.83 9.85 KM Plot
THCA rs11731978 chr4:88194170 C/T 0.000271 490 9.73 15.33 16.25 KM Plot
THCA rs11732259 chr4:1064557 A/G 2.78E-5 487 15.93 15.3 9.85 KM Plot
THCA rs11732700 chr4:88169697 A/T 1.94E-6 483 16.13 15.17 9.73 KM Plot
THCA rs11732868 chr4:88194338 A/G 0.000277 488 16.07 16.23 11.33 KM Plot
THCA rs117332478 chr14:59700507 C/T 2.57E-8 486 16.07 14.9 5.1 KM Plot
THCA rs11734198 chr4:1358793 G/C 1.1E-7 488 16.27 14.97 6.83 KM Plot
THCA rs11734257 chr4:88188543 C/A 0.000122 485 15.97 16.4 12.93 KM Plot
THCA rs117384343 chr10:90388730 G/A 0.000276 474 16.33 15.9 12.6 KM Plot
THCA rs11738987 chr5:81200772 A/G 0.000263 487 15.93 15 27.82 KM Plot
THCA rs11741569 chr5:81325910 C/G 0.0001 490 17.97 16.37 15.83 KM Plot